CDS

Accession Number TCMCG017C02208
gbkey CDS
Protein Id OMP11996.1
Location 272..859
GeneID InterPro:IPR001841
Organism Corchorus olitorius
locus_tag COLO4_03538

Protein

Length 195aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01010011.1
Definition Zinc finger, RING-type [Corchorus olitorius]
Locus_tag COLO4_03538

EGGNOG-MAPPER Annotation

COG_category O
Description RING-H2 finger protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010200        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010966        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043269        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044070        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070417        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTCGTCATTTGATACTCCTAGGCGCCGCCAACTCCTCGGCAACCACCACCCAGCTGCCGCCTCCACCTCCACCCGAACAAGCGGCGACTGTCGACTCCGACTTTGTTGTAATTCTTGCCGCTTTACTCTGTGCTCTTATTTGTGTGCTTGGTCTCATAGCTGTTGCACGCTGCGCCTGGCTTCGCCGCCTCTCCGGCGGCGCTGCCTCTAACCAAGCTGCTACATCTCGTCCTACGCCTCCTGCGAACAAAGGCCTCAAGAAGAAGATCCTCAAGTCTCTCCCCAAGGTTGCCTTCTCGGCCGAGTCCTCTACAAAATTCTCTGAGTGCGCGATTTGCTTGACAGAATTCGCGGTAGGTGATGAAATCCGGGTGTTGCCGCAGTGTGGGCACGGCTTTCACGTTGCCTGCATCGACACATGGCTGGGATCCCATTCTTCCTGCCCTTCATGCCGTCAGATTCTGGTGGTTGCAAGATGCTACAAGTGCGGGGGTTTGCCAGCCGTGGGGGCTTCAACCTCTGGAACTGAGACTGAGGCCCGGTTGAAGGAGCGTGAAGATGATGCCAATAGGTTCTTGCCATAG
Protein:  
MTRHLILLGAANSSATTTQLPPPPPPEQAATVDSDFVVILAALLCALICVLGLIAVARCAWLRRLSGGAASNQAATSRPTPPANKGLKKKILKSLPKVAFSAESSTKFSECAICLTEFAVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCYKCGGLPAVGASTSGTETEARLKEREDDANRFLP